STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720185_02328Unannotated protein. (351 aa)    
Predicted Functional Partners:
GCA_000720185_00718
Unannotated protein.
    
   0.827
GCA_000720185_05025
Unannotated protein.
   
  0.806
GCA_000720185_02327
Unannotated protein.
       0.793
GCA_000720185_01550
Unannotated protein.
  
 
   0.790
GCA_000720185_04694
Unannotated protein.
  
 
   0.789
GCA_000720185_04068
Unannotated protein.
    
   0.750
GCA_000720185_04387
Unannotated protein.
  
 
 
 0.743
GCA_000720185_04245
Unannotated protein.
    
  0.703
GCA_000720185_04239
Unannotated protein.
   
   0.694
GCA_000720185_00716
Unannotated protein.
   
   0.682
Your Current Organism:
Streptomyces sp. NRRLS340
NCBI taxonomy Id: 1463901
Other names: S. sp. NRRL S-340, Streptomyces sp. NRRL S-340
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.