STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718785_02780Unannotated protein. (296 aa)    
Predicted Functional Partners:
GCA_000718785_05647
Unannotated protein.
 
 
  0.803
GCA_000718785_00486
Unannotated protein.
 
 
 0.770
GCA_000718785_05640
Unannotated protein.
 
  
 0.723
GCA_000718785_01707
Unannotated protein.
  
 0.720
GCA_000718785_05641
Unannotated protein.
 
  
 0.695
GCA_000718785_06264
Unannotated protein.
 
 
 0.691
GCA_000718785_00631
Unannotated protein.
 
 
 0.677
GCA_000718785_03047
Unannotated protein.
 
 
  0.580
GCA_000718785_05649
Unannotated protein.
  
     0.527
GCA_000718785_07007
Unannotated protein.
  
 
  0.518
Your Current Organism:
Streptomyces sp. NRRLWC3626
NCBI taxonomy Id: 1463926
Other names: S. sp. NRRL WC-3626, Streptomyces sp. NRRL WC-3626
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.