Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDB81112.1 | SDB91294.1 | SAMN05421737_10123 | SAMN05421737_103123 | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family. | Penicillin-binding protein 1A. | 0.646 |
| SDB81112.1 | SDB98336.1 | SAMN05421737_10123 | SAMN05421737_104203 | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family. | Penicillin-binding protein. | 0.792 |
| SDB81112.1 | SDC32880.1 | SAMN05421737_10123 | SAMN05421737_107105 | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family. | Cell elongation-specific peptidoglycan D,D-transpeptidase. | 0.837 |
| SDB81112.1 | SDC34935.1 | SAMN05421737_10123 | SAMN05421737_107167 | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family. | Penicillin-binding protein 2B. | 0.917 |
| SDB81112.1 | SDC35015.1 | SAMN05421737_10123 | SAMN05421737_107169 | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family. | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | 0.917 |
| SDB81112.1 | murC | SAMN05421737_10123 | SAMN05421737_10136 | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.795 |
| SDB91294.1 | SDB81112.1 | SAMN05421737_103123 | SAMN05421737_10123 | Penicillin-binding protein 1A. | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family. | 0.646 |
| SDB91294.1 | SDB92474.1 | SAMN05421737_103123 | SAMN05421737_103231 | Penicillin-binding protein 1A. | DivIVA domain-containing protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | 0.789 |
| SDB91294.1 | SDB96162.1 | SAMN05421737_103123 | SAMN05421737_104112 | Penicillin-binding protein 1A. | N-acetylmuramoyl-L-alanine amidase. | 0.719 |
| SDB91294.1 | SDB98336.1 | SAMN05421737_103123 | SAMN05421737_104203 | Penicillin-binding protein 1A. | Penicillin-binding protein. | 0.641 |
| SDB91294.1 | SDC32880.1 | SAMN05421737_103123 | SAMN05421737_107105 | Penicillin-binding protein 1A. | Cell elongation-specific peptidoglycan D,D-transpeptidase. | 0.679 |
| SDB91294.1 | SDC34935.1 | SAMN05421737_103123 | SAMN05421737_107167 | Penicillin-binding protein 1A. | Penicillin-binding protein 2B. | 0.641 |
| SDB91294.1 | SDC35015.1 | SAMN05421737_103123 | SAMN05421737_107169 | Penicillin-binding protein 1A. | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | 0.689 |
| SDB91294.1 | SDC35760.1 | SAMN05421737_103123 | SAMN05421737_107190 | Penicillin-binding protein 1A. | Cell division initiation protein. | 0.662 |
| SDB91294.1 | murC | SAMN05421737_103123 | SAMN05421737_10136 | Penicillin-binding protein 1A. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.690 |
| SDB91294.1 | recU | SAMN05421737_103123 | SAMN05421737_103124 | Penicillin-binding protein 1A. | Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. | 0.640 |
| SDB92474.1 | SDB91294.1 | SAMN05421737_103231 | SAMN05421737_103123 | DivIVA domain-containing protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | Penicillin-binding protein 1A. | 0.789 |
| SDB92474.1 | SDC32880.1 | SAMN05421737_103231 | SAMN05421737_107105 | DivIVA domain-containing protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | Cell elongation-specific peptidoglycan D,D-transpeptidase. | 0.738 |
| SDB92474.1 | murC | SAMN05421737_103231 | SAMN05421737_10136 | DivIVA domain-containing protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.663 |
| SDB92474.1 | recU | SAMN05421737_103231 | SAMN05421737_103124 | DivIVA domain-containing protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. | 0.694 |
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