STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB92352.1Hypothetical protein. (116 aa)    
Predicted Functional Partners:
SDB92341.1
Ribosomal-protein-alanine N-acetyltransferase.
       0.584
SDB92329.1
Protein N-acetyltransferase, RimJ/RimL family.
       0.551
SDB92361.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
       0.527
SDB92320.1
NUDIX domain-containing protein.
       0.504
Your Current Organism:
Bacillus lonarensis
NCBI taxonomy Id: 1464122
Other names: B. lonarensis, Bacillus lonarensis Reddy et al. 2015, Bacillus sp. 25nlg, CGMCC 1.12817, KCTC 33413, LMG 27974, LMG:27974, strain 25nlg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.