STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC43695.1Protein of unknown function. (255 aa)    
Predicted Functional Partners:
SDC43735.1
Helix-turn-helix domain-containing protein.
  
    0.798
SDC77453.1
Uncharacterized conserved protein YutE, UPF0331/DUF86 family.
  
     0.734
SDC25173.1
Succinate dehydrogenase subunit C.
  
     0.686
SDC43653.1
Protein of unknown function.
 
     0.652
SDC54835.1
Membrane protein CcdC involved in cytochrome C biogenesis.
  
     0.636
SDC43767.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
    0.567
SDC60289.1
CopG family transcriptional regulator / antitoxin EndoAI.
  
     0.518
cinA
Competence/damage-inducible protein cinA; Belongs to the CinA family.
  
    0.512
SDC25136.1
Succinate dehydrogenase subunit A.
  
     0.497
SDB81246.1
Acetoin utilization protein AcuA; Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue.
  
     0.494
Your Current Organism:
Bacillus lonarensis
NCBI taxonomy Id: 1464122
Other names: B. lonarensis, Bacillus lonarensis Reddy et al. 2015, Bacillus sp. 25nlg, CGMCC 1.12817, KCTC 33413, LMG 27974, LMG:27974, strain 25nlg
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