STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER50818.1Uncharacterized protein YlaN, UPF0358 family; Belongs to the UPF0358 family. (98 aa)    
Predicted Functional Partners:
SER51305.1
Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.
 
     0.795
SES29506.1
Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.
  
     0.757
SER64285.1
YwhD family protein.
  
     0.674
SER50784.1
Hypothetical protein.
 
     0.618
SER51337.1
Uncharacterized protein YlbG, UPF0298 family.
 
     0.563
SES22710.1
Uncharacterized protein YutD.
  
     0.551
SER44900.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
  
     0.543
SES36214.1
Uncharacterized membrane protein YgaE, UPF0421/DUF939 family.
  
     0.513
SES17757.1
Uncharacterized protein YtpQ, UPF0354 family.
  
     0.509
SES17665.1
Uncharacterized protein YoxC, contains an MCP-like domain.
  
     0.508
Your Current Organism:
Salisediminibacterium haloalkalitolerans
NCBI taxonomy Id: 1464123
Other names: CGMCC 1.12818, KCTC 33414, S. haloalkalitolerans, Salisediminibacterium haloalkalitolerans Sultanpuram et al. 2015, Salisediminibacterium sp. 10nlg, strain 10nlg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.