STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER71222.1H+/gluconate symporter. (430 aa)    
Predicted Functional Partners:
SER71256.1
Propionate CoA-transferase; Belongs to the 3-oxoacid CoA-transferase family.
 
     0.814
SER71191.1
3-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.675
SES28540.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
  
  
 0.528
SES31941.1
6-phosphogluconate dehydrogenase.
  
  
 0.508
lcdH
Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
    0.491
SES10449.1
40-residue YVTN family beta-propeller repeat-containing protein.
  
     0.484
SES13534.1
PTS system, fructose-specific IIC component.
     
 0.473
SES31975.1
Gluconokinase; Belongs to the FGGY kinase family.
  
  
 0.430
xylB
Xylulokinase.
  
  
 0.430
hisI
phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase; In the N-terminal section; belongs to the PRA-CH family.
      
 0.403
Your Current Organism:
Salisediminibacterium haloalkalitolerans
NCBI taxonomy Id: 1464123
Other names: CGMCC 1.12818, KCTC 33414, S. haloalkalitolerans, Salisediminibacterium haloalkalitolerans Sultanpuram et al. 2015, Salisediminibacterium sp. 10nlg, strain 10nlg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.