STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER81805.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
SER81774.1
YceG-like family protein.
  
  
 0.927
SES35573.1
Hypothetical protein.
 
  
 0.827
SER81588.1
Protein of unknown function.
  
     0.752
SES19855.1
Competence protein CoiA-like family, contains a predicted nuclease domain.
  
     0.652
SES18382.1
Protein of unknown function.
  
     0.622
SER46094.1
Hypothetical protein.
  
     0.616
SES34596.1
Two-component signal transduction system YycFG, regulatory protein YycH.
  
     0.614
SER56273.1
Hypothetical protein.
  
     0.613
SES27703.1
DUF4097 and DUF4098 domain-containing protein YvlB.
  
     0.605
SES36214.1
Uncharacterized membrane protein YgaE, UPF0421/DUF939 family.
  
     0.601
Your Current Organism:
Salisediminibacterium haloalkalitolerans
NCBI taxonomy Id: 1464123
Other names: CGMCC 1.12818, KCTC 33414, S. haloalkalitolerans, Salisediminibacterium haloalkalitolerans Sultanpuram et al. 2015, Salisediminibacterium sp. 10nlg, strain 10nlg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.