STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER90897.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
SER90869.1
Type I restriction enzyme, R subunit.
       0.699
SER90803.1
Type I restriction enzyme M protein.
       0.685
SER90840.1
Type I restriction enzyme, S subunit.
       0.684
SES17665.1
Uncharacterized protein YoxC, contains an MCP-like domain.
   
    0.551
SES25813.1
Uncharacterized protein YoxC, contains an MCP-like domain.
   
    0.551
SER71513.1
Hypothetical protein.
   
    0.478
SES18995.1
Uncharacterized integral membrane protein.
  
    0.471
SER90937.1
Superfamily II DNA or RNA helicase, SNF2 family.
       0.405
Your Current Organism:
Salisediminibacterium haloalkalitolerans
NCBI taxonomy Id: 1464123
Other names: CGMCC 1.12818, KCTC 33414, S. haloalkalitolerans, Salisediminibacterium haloalkalitolerans Sultanpuram et al. 2015, Salisediminibacterium sp. 10nlg, strain 10nlg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.