STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES08186.1Radical SAM/CxCxxxxC motif protein YfkAB. (373 aa)    
Predicted Functional Partners:
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.676
SER67545.1
Diguanylate cyclase (GGDEF) domain-containing protein.
     
 0.671
SER64285.1
YwhD family protein.
  
     0.639
SER64418.1
Uncharacterized protein YuzB, UPF0349 family; Belongs to the UPF0741 family.
  
     0.639
SER54283.1
Hypothetical protein.
  
     0.608
SES14248.1
Nuclease-related domain-containing protein.
  
     0.590
SER56273.1
Hypothetical protein.
  
     0.560
SES22691.1
Protein of unknown function.
  
    0.556
moaA
Cyclic pyranopterin phosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
    
 0.543
SER90473.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
     
 0.541
Your Current Organism:
Salisediminibacterium haloalkalitolerans
NCBI taxonomy Id: 1464123
Other names: CGMCC 1.12818, KCTC 33414, S. haloalkalitolerans, Salisediminibacterium haloalkalitolerans Sultanpuram et al. 2015, Salisediminibacterium sp. 10nlg, strain 10nlg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.