STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES30446.1Cytidine deaminase. (137 aa)    
Predicted Functional Partners:
SER44736.1
Pyrimidine-nucleoside phosphorylase.
  
 
 0.876
udk
Uridine kinase.
    
 0.839
tdk
Thymidine kinase.
    
 0.836
SER40403.1
Deoxyadenosine/deoxycytidine kinase.
     
 0.815
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
    0.737
deoD
Purine-nucleoside phosphorylase.
  
 
 0.699
SER40375.1
Deoxyguanosine kinase.
     
 0.697
SES28188.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase/2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase; Belongs to the 5'-nucleotidase family.
  
 
  0.683
SES22847.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family.
    
  0.634
SES36661.1
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
 0.593
Your Current Organism:
Salisediminibacterium haloalkalitolerans
NCBI taxonomy Id: 1464123
Other names: CGMCC 1.12818, KCTC 33414, S. haloalkalitolerans, Salisediminibacterium haloalkalitolerans Sultanpuram et al. 2015, Salisediminibacterium sp. 10nlg, strain 10nlg
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