STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylAXylose isomerase; Belongs to the xylose isomerase family. (437 aa)    
Predicted Functional Partners:
xylB
Xylulokinase.
 
 
 0.985
SES34120.1
Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.876
SES34096.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
 
  
 0.832
SER61266.1
ROK family protein (putative glucokinase).
    
 0.815
SES13534.1
PTS system, fructose-specific IIC component.
     
 0.788
SES31975.1
Gluconokinase; Belongs to the FGGY kinase family.
 
 
 0.715
SES05713.1
Sugar or nucleoside kinase, ribokinase family.
     
 0.664
SES35870.1
Fructokinase; Belongs to the carbohydrate kinase PfkB family.
    
 0.664
SER61216.1
Beta-galactosidase/evolved beta-galactosidase subunit alpha.
    
 0.663
SES05858.1
Glycosyl hydrolases family 2; Belongs to the glycosyl hydrolase 2 family.
    
 0.656
Your Current Organism:
Salisediminibacterium haloalkalitolerans
NCBI taxonomy Id: 1464123
Other names: CGMCC 1.12818, KCTC 33414, S. haloalkalitolerans, Salisediminibacterium haloalkalitolerans Sultanpuram et al. 2015, Salisediminibacterium sp. 10nlg, strain 10nlg
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