STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES36864.1C-3',4' desaturase CrtD. (497 aa)    
Predicted Functional Partners:
SER45283.1
Phytoene synthase.
 
 
 0.897
SER45135.1
Putative membrane protein.
 
  
 0.837
SER45692.1
Phytoene dehydrogenase-related protein.
  
 
 0.795
SER45174.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
  
 0.784
SER67690.1
Farnesyl-diphosphate farnesyltransferase.
 
 
 0.732
SES27466.1
Diapolycopene oxygenase.
  
     0.730
SES36876.1
Phosphoglycolate phosphatase, HAD superfamily.
  
    0.713
SER45242.1
Phytoene desaturase.
  
     0.712
SER45317.1
Phytoene desaturase.
  
     0.697
SES23918.1
Hypothetical protein.
  
     0.689
Your Current Organism:
Salisediminibacterium haloalkalitolerans
NCBI taxonomy Id: 1464123
Other names: CGMCC 1.12818, KCTC 33414, S. haloalkalitolerans, Salisediminibacterium haloalkalitolerans Sultanpuram et al. 2015, Salisediminibacterium sp. 10nlg, strain 10nlg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.