Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP52973.1 | SFP57984.1 | SAMN05444277_10149 | SAMN05444277_101254 | Signal transduction histidine kinase. | Lipoprotein Spr. | 0.455 |
SFP52973.1 | SFQ28446.1 | SAMN05444277_10149 | SAMN05444277_10821 | Signal transduction histidine kinase. | Putative chitinase. | 0.512 |
SFP57910.1 | SFP57936.1 | SAMN05444277_101251 | SAMN05444277_101252 | Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family. | DNA polymerase III, alpha subunit. | 0.603 |
SFP57910.1 | SFP57959.1 | SAMN05444277_101251 | SAMN05444277_101253 | Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein. | 0.580 |
SFP57910.1 | SFP57984.1 | SAMN05444277_101251 | SAMN05444277_101254 | Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Lipoprotein Spr. | 0.430 |
SFP57936.1 | SFP57910.1 | SAMN05444277_101252 | SAMN05444277_101251 | DNA polymerase III, alpha subunit. | Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.603 |
SFP57936.1 | SFP57959.1 | SAMN05444277_101252 | SAMN05444277_101253 | DNA polymerase III, alpha subunit. | Hypothetical protein. | 0.741 |
SFP57936.1 | SFP57984.1 | SAMN05444277_101252 | SAMN05444277_101254 | DNA polymerase III, alpha subunit. | Lipoprotein Spr. | 0.551 |
SFP57959.1 | SFP57910.1 | SAMN05444277_101253 | SAMN05444277_101251 | Hypothetical protein. | Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.580 |
SFP57959.1 | SFP57936.1 | SAMN05444277_101253 | SAMN05444277_101252 | Hypothetical protein. | DNA polymerase III, alpha subunit. | 0.741 |
SFP57959.1 | SFP57984.1 | SAMN05444277_101253 | SAMN05444277_101254 | Hypothetical protein. | Lipoprotein Spr. | 0.558 |
SFP57984.1 | SFP52973.1 | SAMN05444277_101254 | SAMN05444277_10149 | Lipoprotein Spr. | Signal transduction histidine kinase. | 0.455 |
SFP57984.1 | SFP57910.1 | SAMN05444277_101254 | SAMN05444277_101251 | Lipoprotein Spr. | Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.430 |
SFP57984.1 | SFP57936.1 | SAMN05444277_101254 | SAMN05444277_101252 | Lipoprotein Spr. | DNA polymerase III, alpha subunit. | 0.551 |
SFP57984.1 | SFP57959.1 | SAMN05444277_101254 | SAMN05444277_101253 | Lipoprotein Spr. | Hypothetical protein. | 0.558 |
SFP57984.1 | SFQ28446.1 | SAMN05444277_101254 | SAMN05444277_10821 | Lipoprotein Spr. | Putative chitinase. | 0.537 |
SFQ28446.1 | SFP52973.1 | SAMN05444277_10821 | SAMN05444277_10149 | Putative chitinase. | Signal transduction histidine kinase. | 0.512 |
SFQ28446.1 | SFP57984.1 | SAMN05444277_10821 | SAMN05444277_101254 | Putative chitinase. | Lipoprotein Spr. | 0.537 |