STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP61115.1RHS repeat-associated core domain-containing protein. (1358 aa)    
Predicted Functional Partners:
SFP61160.1
Uncharacterized conserved protein, implicated in type VI secretion and phage assembly.
 
  
 0.933
SFP61095.1
Hypothetical protein.
       0.762
SFP61139.1
Hypothetical protein.
  
    0.753
SFQ31185.1
RHS repeat-associated core domain-containing protein.
  
     0.649
SFP95055.1
IPT/TIG domain-containing protein.
  
     0.595
SFQ31162.1
PA14 domain-containing protein.
  
    0.557
SFP95273.1
Protein of unknown function.
  
     0.481
SFQ44094.1
F5/8 type C domain-containing protein.
  
 
  0.475
SFP61184.1
Hypothetical protein.
  
    0.474
SFQ07416.1
DNA sulfur modification protein DndD.
   
   0.424
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.