STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP53098.1Protein of unknown function. (99 aa)    
Predicted Functional Partners:
SFP73182.1
Uncharacterized metal-binding protein YceD, DUF177 family.
  
     0.739
SFQ52261.1
Protein of unknown function.
  
     0.722
SFP55959.1
Hypothetical protein.
  
     0.706
SFQ41227.1
Hypothetical protein.
  
     0.651
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.644
SFQ08042.1
Gliding motility associated protien GldN.
  
     0.644
SFP90970.1
Flagellum-specific peptidoglycan hydrolase FlgJ.
  
     0.639
SFQ32591.1
pRiA4b ORF-3-like protein.
  
     0.614
SFQ53411.1
Protein of unknown function.
  
     0.605
SFQ00693.1
Thiol:disulfide interchange protein DsbD.
  
     0.580
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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