STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP67836.1Uncharacterized conserved protein. (419 aa)    
Predicted Functional Partners:
SFP67858.1
Hypothetical protein.
       0.773
SFP67788.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
     0.663
SFP67813.1
Hypothetical protein.
       0.596
SFP67881.1
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase.
       0.458
SFP67912.1
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase.
       0.458
SFP54028.1
Acyltransferase.
  
     0.457
SFP98967.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.455
SFQ51085.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.431
folE
GTP cyclohydrolase I.
       0.417
SFQ31343.1
RHS repeat-associated core domain-containing protein.
  
  
  0.408
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.