STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP84896.1solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (525 aa)    
Predicted Functional Partners:
SFP84921.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
 
  
 0.868
SFP84874.1
alpha-L-rhamnosidase.
 
     0.810
SFQ10059.1
L-proline dehydrogenase.
  
  
 0.698
SFP84966.1
Sugar phosphate isomerase/epimerase.
 
    0.669
SFP84946.1
Hypothetical protein.
     0.654
SFQ45689.1
Protein of unknown function.
 
     0.563
SFP84851.1
Protein of unknown function.
       0.559
SFP84828.1
Trehalase.
 
    0.550
SFQ45671.1
Hypothetical protein.
  
     0.545
SFP84733.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
    0.517
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.