STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP85393.1Uncharacterized conserved protein YeaO, DUF488 family. (115 aa)    
Predicted Functional Partners:
SFP85417.1
Hemoglobin.
       0.790
SFP85439.1
Cupin domain-containing protein.
       0.774
SFP85459.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein.
 
     0.674
SFP85370.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
       0.548
SFP85472.1
Cu-processing system permease protein.
       0.480
SFP85496.1
Cu-processing system ATP-binding protein.
       0.461
SFP85523.1
Nitrous oxidase accessory protein.
       0.461
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.