STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ11535.1Transcriptional regulator. (99 aa)    
Predicted Functional Partners:
SFQ11518.1
Hypothetical protein.
 
     0.945
SFQ11553.1
Inner membrane protein.
 
     0.731
SFP69357.1
Osmoprotectant transport system permease protein.
  
  
 0.506
SFQ11501.1
Peroxiredoxin.
       0.490
SFP52973.1
Signal transduction histidine kinase.
 
  
 0.477
SFQ11583.1
Undecaprenol kinase.
       0.459
SFQ11601.1
Uncharacterized membrane protein.
       0.443
SFQ11572.1
Hypothetical protein.
       0.435
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.