STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ18096.1Type I restriction enzyme M protein. (198 aa)    
Predicted Functional Partners:
SFQ18077.1
Type I restriction enzyme M protein.
     0.994
SFQ18062.1
Type I restriction enzyme, S subunit.
 
 
 0.989
SFQ18024.1
Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.985
SFQ15458.1
Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.954
SFQ15582.1
Type I restriction enzyme, S subunit.
 
 
 0.940
SFQ18004.1
Hypothetical protein.
 
     0.928
SFP93581.1
Type I restriction enzyme M protein.
 
 
 0.832
SFQ18042.1
Hypothetical protein.
       0.773
SFQ55623.1
Type I restriction-modification system, DNA methylase subunit.
  
     0.757
SFQ15643.1
Type I restriction enzyme M protein.
  
     0.599
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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