STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ18298.1Transporter family protein. (138 aa)    
Predicted Functional Partners:
SFQ18315.1
Iron complex outermembrane recepter protein/outer membrane receptor for ferrienterochelin and colicins.
       0.718
SFQ18331.1
Putative beta-lactamase-inhibitor-like, PepSY-like.
       0.718
SFQ18348.1
PAP2 superfamily protein.
       0.517
SFQ50236.1
Quaternary ammonium compound-resistance protein SugE.
    
  0.505
SFQ18385.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
       0.431
SFQ18366.1
Signal transduction histidine kinase.
       0.429
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.