STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ23506.1Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family. (335 aa)    
Predicted Functional Partners:
SFQ23541.1
Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.870
SFQ23526.1
BNR repeat-like domain-containing protein.
 
  
  0.853
SFQ23468.1
Hypothetical protein.
       0.727
SFQ23487.1
Hypothetical protein.
       0.727
SFQ42097.1
Endo-1,4-beta-xylanase.
 
  
 0.649
SFP53169.1
Alpha-L-arabinofuranosidase.
 
  
  0.627
SFP53145.1
Endo-1,4-beta-xylanase.
 
  
 0.610
SFP53235.1
alpha-N-arabinofuranosidase.
 
  
  0.598
SFQ18932.1
Alpha-L-arabinofuranosidase.
 
  
  0.550
SFQ42130.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
     0.532
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.