STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ23609.1Protein of unknown function. (843 aa)    
Predicted Functional Partners:
SFQ23661.1
Beta-L-arabinofuranosidase, GH127.
 
     0.817
SFQ23625.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
  0.814
SFQ23694.1
Protein of unknown function.
 
     0.786
SFQ23559.1
Glycosyl hydrolase family 76.
 
     0.777
SFQ23710.1
Starch-binding associating with outer membrane.
 
     0.763
SFQ23730.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.756
SFQ44070.1
Peptidase.
  
     0.672
SFQ23643.1
Glycosyl hydrolases family 2, TIM barrel domain; Belongs to the glycosyl hydrolase 2 family.
     0.669
SFP65680.1
YhcH/YjgK/YiaL family protein.
   
  0.613
SFQ23592.1
Arylsulfatase.
 
  0.605
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.