STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ23673.1Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. (342 aa)    
Predicted Functional Partners:
SFQ23694.1
Protein of unknown function.
 
     0.838
SFQ23710.1
Starch-binding associating with outer membrane.
 
     0.770
SFQ23661.1
Beta-L-arabinofuranosidase, GH127.
 
     0.674
SFQ23730.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.660
SFP53122.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.641
SFQ23541.1
Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family.
   
 0.631
SFP52354.1
Glycosyl hydrolase family 20, catalytic domain.
  
     0.619
SFQ45124.1
Acetyl esterase/lipase.
 
  
  0.516
SFQ18932.1
Alpha-L-arabinofuranosidase.
  
  
  0.482
SFQ37928.1
Glycosyl hydrolases family 39.
  
  
 0.479
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.