STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ24813.1Endonuclease, Uma2 family (restriction endonuclease fold). (185 aa)    
Predicted Functional Partners:
SFQ02680.1
Putative restriction endonuclease.
  
     0.749
SFP56260.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.741
SFQ54005.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.717
SFQ24830.1
Hypothetical protein.
       0.658
SFQ24790.1
DNA-binding transcriptional regulator, Lrp family.
       0.556
SFQ24852.1
Hypothetical protein.
       0.534
SFQ49598.1
Hypothetical protein.
  
     0.422
SFQ56519.1
Hypothetical protein.
  
     0.406
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
       0.401
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.