STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ40574.1Uncharacterized membrane protein. (288 aa)    
Predicted Functional Partners:
SFQ40451.1
Alpha-galactosidase.
  
     0.772
SFQ40466.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
  
     0.762
SFQ40522.1
Galactosamine 6-phosphate isomerase AgaS.
 
     0.761
SFQ40507.1
Sugar or nucleoside kinase, ribokinase family.
 
     0.749
SFQ40647.1
Protein of unknown function.
 
     0.681
SFQ40482.1
Fructose-bisphosphate aldolase, class II/tagatose 1,6-diphosphate aldolase GatY/KbaY.
 
     0.666
SFQ43036.1
Carbohydrate family 9 binding domain-like.
  
     0.470
SFQ40540.1
Transcriptional regulator, DeoR family.
  
     0.460
SFP61670.1
Repeat domain-containing protein.
  
     0.451
SFP66232.1
Fucose permease.
  
     0.443
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.