STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ41335.1Trehalose utilisation. (281 aa)    
Predicted Functional Partners:
SFQ41320.1
Uncharacterized membrane protein.
       0.737
SFQ17508.1
Hypothetical protein.
 
  
 
0.684
SFQ24955.1
3',5'-cyclic AMP phosphodiesterase CpdA.
  
     0.668
SFQ50290.1
DUF218 domain-containing protein.
 
      0.607
SFQ49513.1
Cytochrome c.
  
  
 
0.582
SFP94930.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
  
  
 
0.572
SFP55601.1
Chitinase.
 
     0.499
SFQ41307.1
GLPGLI family protein.
       0.473
SFQ52641.1
Hypothetical protein.
  
     0.406
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.