STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ43882.1Beta-lactamase enzyme family protein. (306 aa)    
Predicted Functional Partners:
SFQ43870.1
Hypothetical protein.
  
  0.996
SFP89516.1
Spore maturation protein SpmA.
  
  
 0.699
SFQ28446.1
Putative chitinase.
  
 
 0.680
SFQ41013.1
Cell division protein FtsW, lipid II flippase; Belongs to the SEDS family.
  
 
 0.668
SFQ43860.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
       0.602
SFP57828.1
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
  
  
 0.553
SFP71601.1
N-acetylmuramoyl-L-alanine amidase.
     
 0.520
SFQ51999.1
Penicillin-binding protein 2.
  
 
 0.512
SFQ53212.1
Cell division protein FtsI (penicillin-binding protein 3).
  
 
 0.512
SFQ45511.1
Lysozyme.
  
  
  0.509
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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