STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ47566.1PAS domain S-box-containing protein. (418 aa)    
Predicted Functional Partners:
SFP52973.1
Signal transduction histidine kinase.
 
0.999
SFP94377.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
 
 0.999
SFQ47578.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 0.997
SFQ47821.1
Response regulator receiver domain-containing protein.
 0.997
SFQ29064.1
PAS/PAC sensor hybrid histidine kinase.
 0.996
SFP52949.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
0.995
SFP72893.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 0.994
SFQ23766.1
Helix-turn-helix domain-containing protein.
 0.993
SFQ41588.1
Helix-turn-helix domain-containing protein.
 0.993
SFQ00381.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.976
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.