STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ48456.1Lysophospholipase L1. (220 aa)    
Predicted Functional Partners:
SFP59678.1
Lysophospholipase L1.
  
     0.700
SFP91742.1
F5/8 type C domain-containing protein; Belongs to the glycosyl hydrolase 2 family.
   
 0.662
SFP84946.1
Hypothetical protein.
 
  
  0.601
SFP62288.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
      0.565
SFQ51304.1
Phospholipase/Carboxylesterase.
     0.555
SFQ48441.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
       0.536
SFP92048.1
Sialate O-acetylesterase.
 
     0.535
SFP99868.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
   
 0.521
SFP84690.1
Hypothetical protein.
    
  0.513
SFP85268.1
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
    
  0.513
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.