STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ52087.1Esterase PHB depolymerase. (468 aa)    
Predicted Functional Partners:
SFQ52066.1
Transporter, CPA2 family.
 
     0.586
SFQ52075.1
Hypothetical protein.
       0.527
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
     
 0.432
SFQ12641.1
Hypothetical protein.
    
 0.425
SFQ08654.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
    
   0.416
SFQ40507.1
Sugar or nucleoside kinase, ribokinase family.
  
  
  0.416
SFP62108.1
WD40-like Beta Propeller Repeat.
  
     0.410
SFP62204.1
Predicted dehydrogenase.
  
     0.400
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.