STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ52503.1phenylacetate-CoA ligase. (430 aa)    
Predicted Functional Partners:
SFQ52493.1
Hypothetical protein.
 
     0.901
SFQ52473.1
Hypothetical protein.
 
     0.867
SFQ52447.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
 
     0.849
SFQ52454.1
3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.841
SFQ10558.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 
 
 0.836
SFQ01817.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
 
     0.800
SFP92093.1
Outer membrane lipoprotein-sorting protein.
 
    0.797
SFQ01857.1
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
 
     0.797
SFP92137.1
Beta-ketoacyl synthase, N-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.786
SFQ01800.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
  0.776
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.