STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL92444.1Chaperone of endosialidase. (1124 aa)    
Predicted Functional Partners:
SDN23584.1
Hypothetical protein.
  
 
 0.706
SDL92474.1
Hypothetical protein.
       0.697
SDL92505.1
Hypothetical protein.
       0.697
SDL92536.1
Hypothetical protein.
       0.697
SDM92683.1
Hypothetical protein.
   
   0.696
SDN22750.1
Phage conserved hypothetical protein BR0599.
   
   0.696
SDL92417.1
Hypothetical protein.
       0.664
SDL55891.1
Hypothetical protein.
   
   0.575
SDN22711.1
Putative phage tail protein.
   
   0.575
SDN11951.1
Phage tail assembly chaperone protein.
  
  
 0.445
Your Current Organism:
Dendrosporobacter quercicolus
NCBI taxonomy Id: 146817
Other names: ATCC 25974, Clostridium quercicolum, D. quercicolus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.