STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL92642.1Chaperone of endosialidase. (950 aa)    
Predicted Functional Partners:
SDL92750.1
Putative phage tail protein.
  
  
 0.806
SDL92783.1
NlpC/P60 family protein.
  
  
 0.754
SDL92673.1
Hypothetical protein.
       0.732
SDL92717.1
Hypothetical protein.
       0.732
SDN23584.1
Hypothetical protein.
  
 
 0.706
SDM92683.1
Hypothetical protein.
   
   0.696
SDN22750.1
Phage conserved hypothetical protein BR0599.
   
   0.696
SDL92610.1
Hypothetical protein.
       0.671
SDL92816.1
Phage-related protein.
  
    0.671
SDL55891.1
Hypothetical protein.
   
   0.575
Your Current Organism:
Dendrosporobacter quercicolus
NCBI taxonomy Id: 146817
Other names: ATCC 25974, Clostridium quercicolum, D. quercicolus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.