STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL54367.1Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family. (181 aa)    
Predicted Functional Partners:
SDL54413.1
Uncharacterized membrane protein.
 
     0.920
SDL54320.1
Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family.
 
     0.894
SDL69607.1
Hypothetical protein.
  
     0.736
SDL54182.1
Stage III sporulation protein AF.
 
    0.706
SDN00321.1
Protein of unknown function.
  
     0.683
SDM65941.1
Hypothetical protein.
  
     0.678
SDM13079.1
MobA-like NTP transferase domain-containing protein.
  
     0.664
SDL54269.1
Stage III sporulation protein AH.
 
    0.640
SDM48999.1
Hypothetical protein.
  
  
 0.625
SDL53999.1
Stage III sporulation protein AB.
 
     0.614
Your Current Organism:
Dendrosporobacter quercicolus
NCBI taxonomy Id: 146817
Other names: ATCC 25974, Clostridium quercicolum, D. quercicolus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.