STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL56370.1Spore maturation protein B. (179 aa)    
Predicted Functional Partners:
SDL56343.1
Spore maturation protein A.
  
 0.999
SDL56314.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
  
  
 0.822
SDL57803.1
Sporulation integral membrane protein YlbJ.
 
  
 0.756
SDM54427.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
  
  
 0.614
SDN16426.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
  
  
 0.614
SDL55266.1
Stage II sporulation protein M.
  
  
 0.567
SDL56395.1
Glucose inhibited division protein A.
       0.543
SDL56909.1
Stage IV sporulation protein A.
  
   
 0.523
SDL56418.1
NAD(P)H-flavin reductase.
  
    0.483
SDL56444.1
23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family.
       0.483
Your Current Organism:
Dendrosporobacter quercicolus
NCBI taxonomy Id: 146817
Other names: ATCC 25974, Clostridium quercicolum, D. quercicolus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.