STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL64519.1Sulfonate transport system substrate-binding protein. (329 aa)    
Predicted Functional Partners:
SDN10421.1
Taurine transport system permease protein.
 
 
 0.879
SDM28512.1
NitT/TauT family transport system permease protein.
 
 
  0.863
SDM53528.1
Sulfonate transport system permease protein.
 
 
 0.852
SDM28475.1
NitT/TauT family transport system permease protein.
 
 
 0.844
SDM74883.1
NitT/TauT family transport system permease protein.
 
 
 0.843
SDL86065.1
NitT/TauT family transport system permease protein.
 
 
 0.841
SDM05207.1
NitT/TauT family transport system permease protein.
 
 
 0.840
SDN19508.1
NitT/TauT family transport system permease protein.
 
 
 0.839
SDM29459.1
NitT/TauT family transport system permease protein.
 
 
  0.831
SDM27298.1
NitT/TauT family transport system permease protein.
  
 
 0.805
Your Current Organism:
Dendrosporobacter quercicolus
NCBI taxonomy Id: 146817
Other names: ATCC 25974, Clostridium quercicolum, D. quercicolus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.