Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL60175.1 | SDL60255.1 | SAMN04488502_101320 | SAMN04488502_101322 | Type IV pilus assembly protein PilC. | Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.931 |
SDL60175.1 | SDL60329.1 | SAMN04488502_101320 | SAMN04488502_101324 | Type IV pilus assembly protein PilC. | Hypothetical protein. | 0.642 |
SDL60175.1 | SDL60411.1 | SAMN04488502_101320 | SAMN04488502_101326 | Type IV pilus assembly protein PilC. | Hypothetical protein. | 0.496 |
SDL60175.1 | SDL60499.1 | SAMN04488502_101320 | SAMN04488502_101328 | Type IV pilus assembly protein PilC. | Type IV pilus assembly protein PilM. | 0.930 |
SDL60175.1 | SDL70250.1 | SAMN04488502_101320 | SAMN04488502_101603 | Type IV pilus assembly protein PilC. | Type IV pilus assembly protein PilM. | 0.904 |
SDL60175.1 | SDL70285.1 | SAMN04488502_101320 | SAMN04488502_101604 | Type IV pilus assembly protein PilC. | Leader peptidase (prepilin peptidase) / N-methyltransferase. | 0.852 |
SDL60175.1 | SDL70321.1 | SAMN04488502_101320 | SAMN04488502_101605 | Type IV pilus assembly protein PilC. | N-terminal methylation site-containing protein. | 0.740 |
SDL60175.1 | SDL70401.1 | SAMN04488502_101320 | SAMN04488502_101607 | Type IV pilus assembly protein PilC. | Twitching motility protein PilT. | 0.836 |
SDL60175.1 | SDL70442.1 | SAMN04488502_101320 | SAMN04488502_101608 | Type IV pilus assembly protein PilC. | Type II secretion system protein E (GspE). | 0.983 |
SDL60255.1 | SDL60175.1 | SAMN04488502_101322 | SAMN04488502_101320 | Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type IV pilus assembly protein PilC. | 0.931 |
SDL60255.1 | SDL60329.1 | SAMN04488502_101322 | SAMN04488502_101324 | Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Hypothetical protein. | 0.779 |
SDL60255.1 | SDL60411.1 | SAMN04488502_101322 | SAMN04488502_101326 | Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Hypothetical protein. | 0.549 |
SDL60255.1 | SDL60499.1 | SAMN04488502_101322 | SAMN04488502_101328 | Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type IV pilus assembly protein PilM. | 0.858 |
SDL60255.1 | SDL70250.1 | SAMN04488502_101322 | SAMN04488502_101603 | Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type IV pilus assembly protein PilM. | 0.781 |
SDL60255.1 | SDL70321.1 | SAMN04488502_101322 | SAMN04488502_101605 | Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | N-terminal methylation site-containing protein. | 0.751 |
SDL60255.1 | SDL70363.1 | SAMN04488502_101322 | SAMN04488502_101606 | Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type IV pilus assembly protein PilC. | 0.852 |
SDL60255.1 | SDL70401.1 | SAMN04488502_101322 | SAMN04488502_101607 | Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Twitching motility protein PilT. | 0.827 |
SDL60255.1 | SDL70442.1 | SAMN04488502_101322 | SAMN04488502_101608 | Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type II secretion system protein E (GspE). | 0.861 |
SDL60329.1 | SDL60175.1 | SAMN04488502_101324 | SAMN04488502_101320 | Hypothetical protein. | Type IV pilus assembly protein PilC. | 0.642 |
SDL60329.1 | SDL60255.1 | SAMN04488502_101324 | SAMN04488502_101322 | Hypothetical protein. | Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.779 |
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