STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL83003.1Methyl-accepting chemotaxis sensory transducer with Cache sensor. (655 aa)    
Predicted Functional Partners:
SDL79238.1
Two-component system, chemotaxis family, response regulator CheV.
 
 0.999
SDN17061.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 0.999
SDM24570.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.987
SDN05633.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.985
SDL73654.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.983
SDL73618.1
Purine-binding chemotaxis protein CheW.
 
 0.979
SDM12984.1
CheW protein.
 
 0.979
cheB
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 0.956
SDM54637.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
0.948
SDN16457.1
Chemotaxis protein methyltransferase CheR.
 0.943
Your Current Organism:
Dendrosporobacter quercicolus
NCBI taxonomy Id: 146817
Other names: ATCC 25974, Clostridium quercicolum, D. quercicolus
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