STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL84969.12,4-dienoyl-CoA reductase. (643 aa)    
Predicted Functional Partners:
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 0.989
SDN17061.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.869
SDN01457.1
Glutamate synthase (NADPH) GltB3 subunit.
   
0.863
SDN05834.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.861
SDL70121.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
  
 0.858
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
  
 0.846
SDN30391.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
  
 0.837
SDL70067.1
4Fe-4S binding domain-containing protein.
  
 0.829
SDL63125.1
Nitroreductase.
 
 
 0.817
SDN27007.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.814
Your Current Organism:
Dendrosporobacter quercicolus
NCBI taxonomy Id: 146817
Other names: ATCC 25974, Clostridium quercicolum, D. quercicolus
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