STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM09351.1Hydrogenase maturation protein, carbamoyl dehydratase HypE. (334 aa)    
Predicted Functional Partners:
SDM09316.1
Hydrogenase expression/formation protein HypD.
 
 0.999
SDM09285.1
Hydrogenase maturation protein HypC.
 
 
 0.998
SDM09256.1
Hydrogenase maturation protein, carbamoyltransferase HypF.
 
 
 0.996
hypA
Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.862
SDM65430.1
Hydrogenase large subunit.
 
   
 0.858
SDN16589.1
Hydrogenase nickel incorporation protein HypB.
 
  
 0.856
SDM65395.1
Hydrogenase small subunit.
 
   
 0.855
SDL75637.1
Hydrogenase maturation protease.
 
   
 0.848
SDM88048.1
Flagellar protein FlaG.
    
   0.709
SDM09403.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.651
Your Current Organism:
Dendrosporobacter quercicolus
NCBI taxonomy Id: 146817
Other names: ATCC 25974, Clostridium quercicolum, D. quercicolus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.