STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM10584.1Amino acid ABC transporter membrane protein 2, PAAT family. (216 aa)    
Predicted Functional Partners:
SDM10486.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.999
SDM10518.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.994
SDM89147.1
Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.992
SDM92947.1
Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.992
SDM10550.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 
 
0.978
SDM54051.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.958
SDM42603.1
Polar amino acid transport system ATP-binding protein.
 0.951
SDM37829.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.951
SDM54011.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.951
SDM89223.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.951
Your Current Organism:
Dendrosporobacter quercicolus
NCBI taxonomy Id: 146817
Other names: ATCC 25974, Clostridium quercicolum, D. quercicolus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.