STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM05429.1Hypothetical protein. (222 aa)    
Predicted Functional Partners:
SDM05391.1
Hybrid cluster protein-associated redox disulfide domain-containing protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
     0.836
SDM05465.1
L-lysine exporter family protein LysE/ArgO.
       0.529
SDN37572.1
Hypothetical protein.
  
     0.516
SDM05508.1
CYTH domain-containing protein.
       0.495
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
       0.453
SDN28754.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
  
     0.448
SDN37432.1
Polysaccharide deacetylase.
  
     0.429
Your Current Organism:
Dendrosporobacter quercicolus
NCBI taxonomy Id: 146817
Other names: ATCC 25974, Clostridium quercicolum, D. quercicolus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.