STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM27404.1Predicted secreted protein. (211 aa)    
Predicted Functional Partners:
SDM27436.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
       0.773
SDM27465.1
Dihydropyrimidinase.
       0.741
SDM27498.1
Allantoate deiminase.
       0.741
SDM27365.1
NitT/TauT family transport system substrate-binding protein.
       0.522
SDL47732.1
Glutamine synthetase.
  
     0.503
SDM27259.1
NitT/TauT family transport system ATP-binding protein.
       0.469
SDM27298.1
NitT/TauT family transport system permease protein.
       0.469
SDM27330.1
NitT/TauT family transport system permease protein.
       0.469
SDL69509.1
Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain.
  
     0.451
Your Current Organism:
Dendrosporobacter quercicolus
NCBI taxonomy Id: 146817
Other names: ATCC 25974, Clostridium quercicolum, D. quercicolus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.