STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM89934.1Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. (379 aa)    
Predicted Functional Partners:
SDM74438.1
Flp pilus assembly protein TadD, contains TPR repeats.
   
 0.978
SDM61697.1
Tetratricopeptide repeat-containing protein.
    
 
 0.796
SDM61734.1
Hypothetical protein.
    
 
 0.796
SDM90012.1
Hypothetical protein.
    
 0.773
secD
Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
 
 
  0.742
SDL72938.1
Regulator of sigma E protease.
 
  
 0.730
SDM49390.1
Hypothetical protein.
  
 
 0.719
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
 
 0.700
SDM89902.1
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB.
 
  
 0.692
SDM49568.1
Serine protease Do.
 
  
 0.677
Your Current Organism:
Dendrosporobacter quercicolus
NCBI taxonomy Id: 146817
Other names: ATCC 25974, Clostridium quercicolum, D. quercicolus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.