STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM93459.1ATP-binding cassette, subfamily B. (574 aa)    
Predicted Functional Partners:
SDM74438.1
Flp pilus assembly protein TadD, contains TPR repeats.
   
 0.949
pstB
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.899
SDM92902.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
     
0.899
SDN16960.1
Polar amino acid transport system ATP-binding protein.
 
     
0.898
SDM84500.1
Polar amino acid transport system ATP-binding protein.
 
     
0.897
SDM54011.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
     
0.896
SDM42603.1
Polar amino acid transport system ATP-binding protein.
 
     
0.892
metN-2
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.888
SDM10486.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
     
0.888
metN
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.839
Your Current Organism:
Dendrosporobacter quercicolus
NCBI taxonomy Id: 146817
Other names: ATCC 25974, Clostridium quercicolum, D. quercicolus
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