Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL58984.1 | SDN07847.1 | SAMN04488502_101290 | SAMN04488502_11187 | Signal peptidase I; Belongs to the peptidase S26 family. | Ribosomal protein S18 acetylase RimI. | 0.628 |
SDL80411.1 | SDN07847.1 | SAMN04488502_101868 | SAMN04488502_11187 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Ribosomal protein S18 acetylase RimI. | 0.662 |
SDM08271.1 | SDN07847.1 | SAMN04488502_102110 | SAMN04488502_11187 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Ribosomal protein S18 acetylase RimI. | 0.501 |
SDM74362.1 | SDN07847.1 | SAMN04488502_1077 | SAMN04488502_11187 | Transcriptional regulator, XRE family with cupin sensor. | Ribosomal protein S18 acetylase RimI. | 0.682 |
SDM74362.1 | pheA | SAMN04488502_1077 | SAMN04488502_1103 | Transcriptional regulator, XRE family with cupin sensor. | Prephenate dehydratase. | 0.711 |
SDN07810.1 | SDN07847.1 | SAMN04488502_11186 | SAMN04488502_11187 | Alpha/beta hydrolase fold. | Ribosomal protein S18 acetylase RimI. | 0.426 |
SDN07810.1 | pheA | SAMN04488502_11186 | SAMN04488502_1103 | Alpha/beta hydrolase fold. | Prephenate dehydratase. | 0.698 |
SDN07847.1 | SDL58984.1 | SAMN04488502_11187 | SAMN04488502_101290 | Ribosomal protein S18 acetylase RimI. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.628 |
SDN07847.1 | SDL80411.1 | SAMN04488502_11187 | SAMN04488502_101868 | Ribosomal protein S18 acetylase RimI. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.662 |
SDN07847.1 | SDM08271.1 | SAMN04488502_11187 | SAMN04488502_102110 | Ribosomal protein S18 acetylase RimI. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.501 |
SDN07847.1 | SDM74362.1 | SAMN04488502_11187 | SAMN04488502_1077 | Ribosomal protein S18 acetylase RimI. | Transcriptional regulator, XRE family with cupin sensor. | 0.682 |
SDN07847.1 | SDN07810.1 | SAMN04488502_11187 | SAMN04488502_11186 | Ribosomal protein S18 acetylase RimI. | Alpha/beta hydrolase fold. | 0.426 |
SDN07847.1 | SDN28240.1 | SAMN04488502_11187 | SAMN04488502_11650 | Ribosomal protein S18 acetylase RimI. | Hypothetical protein. | 0.840 |
SDN07847.1 | argH | SAMN04488502_11187 | SAMN04488502_106239 | Ribosomal protein S18 acetylase RimI. | Argininosuccinate lyase. | 0.400 |
SDN07847.1 | pheA | SAMN04488502_11187 | SAMN04488502_1103 | Ribosomal protein S18 acetylase RimI. | Prephenate dehydratase. | 0.538 |
SDN28240.1 | SDN07847.1 | SAMN04488502_11650 | SAMN04488502_11187 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.840 |
argH | SDN07847.1 | SAMN04488502_106239 | SAMN04488502_11187 | Argininosuccinate lyase. | Ribosomal protein S18 acetylase RimI. | 0.400 |
argH | pheA | SAMN04488502_106239 | SAMN04488502_1103 | Argininosuccinate lyase. | Prephenate dehydratase. | 0.449 |
pheA | SDM74362.1 | SAMN04488502_1103 | SAMN04488502_1077 | Prephenate dehydratase. | Transcriptional regulator, XRE family with cupin sensor. | 0.711 |
pheA | SDN07810.1 | SAMN04488502_1103 | SAMN04488502_11186 | Prephenate dehydratase. | Alpha/beta hydrolase fold. | 0.698 |
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