STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN23345.1Hypothetical protein. (125 aa)    
Predicted Functional Partners:
SDN23278.1
Hypothetical protein.
       0.773
SDN23310.1
Hypothetical protein.
       0.773
SDN23385.1
Hypothetical protein.
       0.773
SDN23424.1
Phage major capsid protein E.
       0.773
SDN23460.1
Hypothetical protein.
       0.701
SDN23500.1
Hypothetical protein.
       0.701
SDN23239.1
Hypothetical protein.
       0.615
SDN23153.1
Hypothetical protein.
       0.498
SDN23189.1
Hypothetical protein.
       0.498
SDN23540.1
Hypothetical protein.
       0.449
Your Current Organism:
Dendrosporobacter quercicolus
NCBI taxonomy Id: 146817
Other names: ATCC 25974, Clostridium quercicolum, D. quercicolus
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.