STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN28283.1Hypothetical protein. (132 aa)    
Predicted Functional Partners:
SDN13789.1
Uncharacterized protein.
  
  
 0.743
SDL90939.1
HDIG domain-containing protein.
  
     0.724
SDL51772.1
Stage II sporulation protein E (SpoIIE).
  
     0.612
SDL49274.1
Ca-activated chloride channel family protein.
 
     0.608
SDL50114.1
RHS repeat-associated core domain-containing protein.
  
     0.566
SDN17289.1
DNA-binding beta-propeller fold protein YncE.
  
     0.536
SDN28240.1
Hypothetical protein.
       0.532
SDM49269.1
Coat F domain-containing protein.
  
     0.491
SDM12815.1
SH3 domain-containing protein.
 
     0.484
SDL49672.1
Serine/threonine protein phosphatase PrpC.
 
     0.478
Your Current Organism:
Dendrosporobacter quercicolus
NCBI taxonomy Id: 146817
Other names: ATCC 25974, Clostridium quercicolum, D. quercicolus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.